After stopping and starting it several times it’s now charging st 12.3ish but when I shut it off the battery goes up to 12.5.
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12.3v is if you have it at 2k RPM?
If that's the case then it's not charging at all, and it goes back up to 12.5 because you removed the load when it's running from lights, speedo, ignition, etc it's not much but would fit the bill.
In that case you need to work your way back and find the VR wire to the battery and make sure your VR wire is hooked up Correctly to a breaker or a fuse (pics will help) and check that breaker or fuse isn't faulty then proceed back to your crimp job or could be rubbed elsewhere along the frame rail. The problem most likely lies in that line (and the wire from VR should be black with a fairly thick rubber coating)
You appear to be receiving AC voltage out of the stator? If measured correctly based on above and chances are the VR wasn't faulty out of the box. So problem is in that line somewhere.
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